DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and tuba8l2

DIOPT Version :9

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_956985.1 Gene:tuba8l2 / 393664 ZFINID:ZDB-GENE-040426-1646 Length:449 Species:Danio rerio


Alignment Length:437 Identity:175/437 - (40%)
Similarity:262/437 - (59%) Gaps:23/437 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 TCFWEIISDEHGIDATGAY--------HGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMD 83
            || ||:...||||...|..        |.||      ...:::|...|||||||:.|||||..:|
Zfish    19 TC-WELYCLEHGIQPDGQMPSHKPVGGHDDS------FTTFFSETGAGKYVPRAIFVDLEPTVID 76

  Fly    84 SVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSL 148
            .||:|.:.|:|.|:..:.|:..|.||:|:||||.|.|::|||||.:||.|:.|..||||.:.||.
Zfish    77 EVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDSVLDRIRKLADQCTGLQGFLVFHSF 141

  Fly   149 GGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDN 213
            |||||||..:||:.::..::..:....:::.|:|:||..||||||:.|:.|..:|::|..:.:||
Zfish   142 GGGTGSGFTSLLMERLSVDFGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDN 206

  Fly   214 EALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPG 278
            ||:||||.|.|.:..|:|.:||.|:|..:|.:|..|||.|.||.||.:...|:||:||:||.:..
Zfish   207 EAIYDICRRNLDIERPSYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLAT 271

  Fly   279 FAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQ 343
            :||:.|.....:..|:|.|:|...|:..|.|..||||||:|:....::||.:..|:|:..:..|:
Zfish   272 YAPVISAEKAYHEQLSVAEITNSCFEPSNQMVKCDPRHGKYMACCLLYRGDVVPKDVNVAIAAIK 336

  Fly   344 NKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRR 400
            .|.|..||:|.|...|..:...||        ..::.:...:.|:|||.|.:.|:..:|..|:.:
Zfish   337 TKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 401

  Fly   401 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEE 447
            :||:|||.||||:|.||:||..:|..|..:|::....:.:||.|.||
Zfish   402 RAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGIDSFEEDEEGEE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 170/423 (40%)
PLN00220 29..438 CDD:215107 168/424 (40%)
tuba8l2NP_956985.1 PTZ00335 1..439 CDD:185562 170/426 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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