DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTub56D and alphaTub67C

DIOPT Version :9

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster


Alignment Length:443 Identity:169/443 - (38%)
Similarity:257/443 - (58%) Gaps:27/443 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WEIISDEHGIDATGAY--------HGDS-----DLQLERINVYYNEASGGKYVPRAVLVDLEPGT 81
            ||:...||||:..|:.        .|.|     |........::.|...||.|||::.|||||..
  Fly    21 WELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFTETGNGKQVPRSIFVDLEPTV 85

  Fly    82 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 146
            :|.||:|...:::.|:..:.|:..|.||:|:|.|:.|.|::|.|...::|.||.||.||||.:.|
  Fly    86 IDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVTSRLQKIAEQCDSLQGFLIFH 150

  Fly   147 SLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 211
            |||||||||..:||:.::..:|..:....::|.||||||..|||||||.|:.|..::::|..:.:
  Fly   151 SLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEPYNALLTTHSTMDHSDCVFMV 215

  Fly   212 DNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 276
            ||||:||||..:|.:..|.|.:||.|::..:|..|..|||.|.:|.||.:...|:|||||:||.:
  Fly   216 DNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMNVDLNEFQTNLVPFPRIHFPL 280

  Fly   277 PGFAPLTS--RGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQM 339
            ..:|||.|  |.:.:..|:|.  ||...|::.|||..||||.|:::....::||.:..|:|:..:
  Fly   281 VAYAPLMSAERSAHEQHAITT--LTNACFESSNMMVKCDPRAGKFMACCMLYRGDVVPKDVNAAV 343

  Fly   340 LNIQNKNSSYFVEWIPNNVKTAV-----CDIPPRGL---KMSATFIGNSTAIQELFKRISEQFTA 396
            ..|::|....||:|.|...|..:     ..:|...|   ..:...:.|:|||...|..:|.:|..
  Fly   344 SAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLSNTTAISVAFSNLSYKFDL 408

  Fly   397 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADE--DAEFEE 447
            ||:::||:|||.||||:|.|||||..|:..|..::::.....|:|  |.:|:|
  Fly   409 MFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEEGGDEDFDE 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 164/427 (38%)
PLN00220 29..438 CDD:215107 164/430 (38%)
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 164/426 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443471
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.