DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and gammaTub37C

DIOPT Version :9

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_001260565.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster


Alignment Length:438 Identity:143/438 - (32%)
Similarity:247/438 - (56%) Gaps:20/438 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQI 93
            ||:.:..||||...|.....:....:|.:|::.:|....|:|||||:||||..::::.:.|:.::
  Fly    21 FWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAVLIDLEPRVINNIMTSPYSKL 85

  Fly    94 FRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGM 156
            :..:|....:  .|||||||.| :::|.::.:.|.|::.:||:..|.|:||.|.||:.|||||||
  Fly    86 YNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSDSLEGFVLCHSIAGGTGSGM 149

  Fly   157 GTLLISKIREEYPDRIMNTYSVVPS-PKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 220
            |:.::.::.|.:|.:::.||||.|: .::||.||:|||:.|::.:|.:..|....:||.||..|.
  Fly   150 GSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRLTKCADSVVVLDNTALNRIA 214

  Fly   221 FRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS- 284
            ...|.:.|||:..:|:|||..||..||.||:|..:|.:|..|..:::|.|:|||.|.|:.||.| 
  Fly   215 TERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASLIPTPQLHFLMTGYTPLMSD 279

  Fly   285 -RGSQQYRALTVPELTQQMFDAKNMM-AACDPRHGR--YLTVAAIFRGRMSMKEVDEQMLNIQNK 345
             ......|..||.::.:::...|||| :|...:..|  ::::..|.:|.:...:|.:.:..|:.:
  Fly   280 CETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNIIQGEVDPSQVHKSLQRIRER 344

  Fly   346 NSSYFVEWIPNNVKTAVCDIPPRGL-------KMSATFIGNSTAIQELFKRISEQFTAMFRRKAF 403
            ..:.|:.|.|.:::.|:    ||..       |:|...:.|.|.|..||||...|:..:.:|.||
  Fly   345 KLANFIPWGPASIQVAL----PRSSPYVQSAHKVSGLMMANHTGISSLFKRALAQYDKLRKRNAF 405

  Fly   404 LHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEEQEA 451
            |..:..|.|.:.:.||.:...:.:....|:|:.||..:..::....||
  Fly   406 LDNFRRESMFQDDLTELDIARDTVDCLVQEYEAATQIDYPQWSPAVEA 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 138/420 (33%)
PLN00220 29..438 CDD:215107 139/423 (33%)
gammaTub37CNP_001260565.1 PLN00222 1..447 CDD:215108 141/430 (33%)
gamma_tubulin 4..436 CDD:276957 138/419 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443485
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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