DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTub56D and tuba4l

DIOPT Version :10

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:XP_073775432.1 Gene:tuba4l / 327377 ZFINID:ZDB-GENE-030131-5588 Length:456 Species:Danio rerio


Alignment Length:428 Identity:170/428 - (39%)
Similarity:260/428 - (60%) Gaps:9/428 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WEIISDEHGIDATGAYHGDS-DLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQI 93
            ||:...|||....|.....| .|.......:::|...||||||||.:||||..:|.:|:|.:.|:
Zfish    28 WELYCLEHGFQPDGTIVDSSRSLADSSFGTFFSETGAGKYVPRAVFIDLEPTVVDEIRNGHYRQL 92

  Fly    94 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGT 158
            :.|:..:.|:..|.||:|:||||.|.|:||||||.:||.|:.|..||||.:.||.|||||||..:
Zfish    93 YHPEQLISGKEDAANNYARGHYTIGKEIVDSVLDRMRKMADQCTGLQGFLIFHSFGGGTGSGFTS 157

  Fly   159 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRT 223
            ||:.::..:|..:....:||.|:|:||..||||||:.|:.|..:|::|.::.:||||::|||.|.
Zfish   158 LLMERLSVDYGKKSKLEFSVYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIFDICKRN 222

  Fly   224 LKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 288
            |.:..|:|.:||.|::..:|.:|..|||.|.||.||.:...|:||:||:||.:..::|:.|....
Zfish   223 LDIERPSYTNLNRLIAQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYSPIISAEKA 287

  Fly   289 QYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 353
            .:..|:|||:|...|:..|.|..||||.|:|:....::||.:..|:|:..:.||:.:.|..||:|
Zfish   288 YHEQLSVPEITNACFEPANQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIANIKTRRSIQFVDW 352

  Fly   354 IPNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGE 410
            .|...|..:...||        ..::.:...:.|:|||.|.:.|:..:|..|:.::||:|||.||
Zfish   353 CPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGRLDHKFDLMYAKRAFVHWYVGE 417

  Fly   411 GMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEE 448
            ||:|.||:||..:|..|..:|::....:.|:..|.|||
Zfish   418 GMEEGEFSEAREDMAALEKDYEEVAADSTDDCGEDEEE 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 PLN00220 29..438 CDD:215107 165/416 (40%)
tuba4lXP_073775432.1 None

Return to query results.
Submit another query.