DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and Tubb4a

DIOPT Version :10

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_543158.1 Gene:Tubb4a / 29213 RGDID:619730 Length:444 Species:Rattus norvegicus


Alignment Length:425 Identity:405/425 - (95%)
Similarity:417/425 - (98%) Gaps:1/425 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQI 93
            |||:||||||||.||.|||||||||||||||||||:||.||||||||||||||||||||||||||
  Rat    20 FWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQI 84

  Fly    94 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGT 158
            ||||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||||||
  Rat    85 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGT 149

  Fly   159 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRT 223
            |||||||||:|||||||:|||||||||||||||||||||||||||||||||||||||||||||||
  Rat   150 LLISKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRT 214

  Fly   224 LKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 288
            ||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   215 LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 279

  Fly   289 QYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 353
            ||||||||||||||||||||||||||||||||||||:|||||||||||||||::|:|||||||||
  Rat   280 QYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEW 344

  Fly   354 IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 418
            |||||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||
  Rat   345 IPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 409

  Fly   419 EAESNMNDLVSEYQQYQEATADEDAEFEEEQEAEV 453
            |||||||||||||||||:||| |:.|||||.|.||
  Rat   410 EAESNMNDLVSEYQQYQDATA-EEGEFEEEAEEEV 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 PLN00220 29..438 CDD:215107 393/408 (96%)
Tubb4aNP_543158.1 PLN00220 1..427 CDD:215107 392/406 (97%)

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