DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and Tubal3

DIOPT Version :9

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_001029051.2 Gene:Tubal3 / 238463 MGIID:3588215 Length:446 Species:Mus musculus


Alignment Length:421 Identity:158/421 - (37%)
Similarity:245/421 - (58%) Gaps:17/421 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WEIISDEHGIDATGAY--HGDSDLQ---LERIN----VYYNEASGGKYVPRAVLVDLEPGTMDSV 85
            ||:...||||...|..  |...:|:   :|.:|    .:::|...||:|||.:.:||||..:|.:
Mouse    21 WELYCLEHGIQPDGFILDHQHDNLENPKVEHMNASLDTFFHETRAGKHVPRTLFMDLEPTVIDGI 85

  Fly    86 RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGG 150
            |.|.:..:|.|:..|.|:..|.|.:|:|.|:.|:|:::.||:.:||.||.|..||||.:..|.||
Mouse    86 RVGRYHSLFHPEQLVNGKEDAANTYARGRYSVGSEVIELVLERIRKLAEQCSGLQGFLIYRSFGG 150

  Fly   151 GTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 215
            |||||..:||:.::..||..:|...:||.|||::|..|||||||.|:.|..:|.:|..:.:||||
Mouse   151 GTGSGFTSLLMERLSVEYCKKIKLEFSVYPSPRISTAVVEPYNAILTTHSTIEYSDCAFMVDNEA 215

  Fly   216 LYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA 280
            |||||...|.:..|:|..:|.|::...|.:|..|||.|.||.||.:...|:||:||:||.:...|
Mouse   216 LYDICQHKLGIERPSYASINRLIAQVSSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPITALA 280

  Fly   281 PLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNK 345
            |:.|........|:|.::|...|:..|.:..||||.|:|:....::||.:..|:|:|.:..::::
Mouse   281 PIISAEKAYQEQLSVSDVTASCFEVSNQLVKCDPRLGKYMACCLLYRGDVVPKDVNEAIAAMKSR 345

  Fly   346 NSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKA 402
            .|..||:|.|...|..:...||        ..::.:...:.|:|||.|.:.|:..:|..|:.:||
Mouse   346 TSVQFVDWCPTGFKVGINYQPPAVVPGGDLARVQRAVCMLSNTTAIVEAWARLDHKFDLMYAKKA 410

  Fly   403 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 433
            |||||..|||:..||.||..::..|..:|::
Mouse   411 FLHWYITEGMELGEFVEAREDLAALEKDYEE 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 158/421 (38%)
PLN00220 29..438 CDD:215107 158/421 (38%)
Tubal3NP_001029051.2 PTZ00335 1..443 CDD:185562 158/421 (38%)
alpha_tubulin 2..442 CDD:276955 158/421 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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