DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and Tuba1c

DIOPT Version :10

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_033474.1 Gene:Tuba1c / 22146 MGIID:1095409 Length:449 Species:Mus musculus


Alignment Length:428 Identity:174/428 - (40%)
Similarity:260/428 - (60%) Gaps:10/428 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WEIISDEHGIDATGAYHGDSDL--QLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQ 92
            ||:...||||...|....|..:  ..:..|.:::|...||:|||||.|||||..:|.||:|.:.|
Mouse    21 WELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQ 85

  Fly    93 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMG 157
            :|.|:..:.|:..|.||:|:||||.|.|::|.|||.:||.|:.|..||||.:.||.|||||||..
Mouse    86 LFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFT 150

  Fly   158 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 222
            :||:.::..:|..:....:|:.|:|:||..||||||:.|:.|..:|::|..:.:||||:||||.|
Mouse   151 SLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215

  Fly   223 TLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 287
            .|.:..|||.:||.|:|..:|.:|..|||.|.||.||.:...|:||:||:||.:..:||:.|...
Mouse   216 NLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEK 280

  Fly   288 QQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 352
            ..:..|||.|:|...|:..|.|..||||||:|:....::||.:..|:|:..:..|:.|.:..||:
Mouse   281 AYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVD 345

  Fly   353 WIPNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG 409
            |.|...|..:...||        ..::.:...:.|:|||.|.:.|:..:|..|:.::||:|||.|
Mouse   346 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 410

  Fly   410 EGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEE 447
            |||:|.||:||..:|..|..:|::....:|:.|.|.||
Mouse   411 EGMEEGEFSEAREDMAALEKDYEEVGADSAEGDDEGEE 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 PLN00220 29..438 CDD:215107 169/417 (41%)
Tuba1cNP_033474.1 PTZ00335 1..448 CDD:185562 172/426 (40%)
MREC motif. /evidence=ECO:0000250|UniProtKB:P68363 1..4
Blue background indicates that the domain is not in the aligned region.

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