DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and Tuba3a

DIOPT Version :10

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_033472.1 Gene:Tuba3a / 22144 MGIID:1095406 Length:450 Species:Mus musculus


Alignment Length:432 Identity:174/432 - (40%)
Similarity:260/432 - (60%) Gaps:14/432 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WEIISDEHGIDATGAYHGDSDL--QLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQ 92
            ||:...||||...|....|..:  ..:..|.:::|...||:|||||.|||||..:|.||:|.:.|
Mouse    21 WELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQ 85

  Fly    93 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMG 157
            :|.|:..:.|:..|.||:|:||||.|.|:||.|||.:||.|:.|..||||.:.||.|||||||..
Mouse    86 LFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFA 150

  Fly   158 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 222
            :||:.::..:|..:....:::.|:|:||..||||||:.|:.|..:|::|..:.:||||:||||.|
Mouse   151 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR 215

  Fly   223 TLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 287
            .|.:..|||.:||.|:...:|.:|..|||.|.||.||.:...|:||:||:||.:..:||:.|...
Mouse   216 NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEK 280

  Fly   288 QQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 352
            ..:..|:|.|:|...|:..|.|..||||||:|:....::||.:..|:|:..:..|:.|.:..||:
Mouse   281 AYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVD 345

  Fly   353 WIPNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG 409
            |.|...|..:...||        ..::.:...:.|:|||.|.:.|:..:|..|:.::||:|||.|
Mouse   346 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG 410

  Fly   410 EGMDEMEFTEAESNMNDLVSEYQQYQEATADE-DAEFEEEQE 450
            |||:|.||:||.   .||.:..:.|:|...|. :||.||.:|
Mouse   411 EGMEEGEFSEAR---EDLAALEKDYEEVGVDSVEAEAEEGEE 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 PLN00220 29..438 CDD:215107 168/417 (40%)
Tuba3aNP_033472.1 PTZ00335 1..440 CDD:185562 169/421 (40%)
MREC motif. /evidence=ECO:0000250|UniProtKB:P68363 1..4
Blue background indicates that the domain is not in the aligned region.

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