DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and tbg-1

DIOPT Version :9

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_499131.1 Gene:tbg-1 / 176361 WormBaseID:WBGene00006540 Length:444 Species:Caenorhabditis elegans


Alignment Length:418 Identity:130/418 - (31%)
Similarity:220/418 - (52%) Gaps:22/418 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGP-FGQ 92
            ||:.:.|||||:..|....:.|:..::..::| :|....||||||||||||..::.:...| |..
 Worm    23 FWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLVDLEPRVINGMMQSPNFSN 86

  Fly    93 IFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSG 155
            :|..||.....  .|||||||.| |.:|.|:.:.::|::.:|||:.:.|.|...|||:.||||||
 Worm    87 LFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSG 150

  Fly   156 MGTLLISKIREEYPDRIMNTYSVVPSPKVS-DTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 219
            .|:||:.::||.:|.:::.||||..:...| |.||.|||..||:.:|:||.|....:||.||:.:
 Worm   151 TGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRL 215

  Fly   220 CFRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 284
            .....|..|||:..:|.||:..||..|...||...:...:|.|  ::.|||.:||.....:|:..
 Worm   216 AAGKFKTDTPTFDHINSLVARIMSTSTAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVD 278

  Fly   285 RGSQQYRALTVPELTQQMFDAKNMMAACDPR---HGRYLTVAAIFRGRMSMKEV--DEQMLNIQN 344
            ......|..:|.::|:.:....:||.:...|   :...|:.....:|::....:  .||.::...
 Worm   279 PNENFTRKTSVADVTRFLLKPTSMMVSTASRVRPNDCMLSAYMFLQGQIEAHTIMTAEQNVDFAI 343

  Fly   345 KNSSYFVEWIPNNVKTAVCD--IPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 407
            :...::: ..|..:..|...  :.|: .|:|...:.|||::..||:.:..::..:..::||:..:
 Worm   344 RRPPFYM-LKPLRMMHAPLSPYVRPQ-YKVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF 406

  Fly   408 TGEGMDEMEFTEAESNMN---DLVSEYQ 432
              |.:|.......:..|:   ||:.||:
 Worm   407 --EKIDNFSLDMMDDAMHIVQDLLDEYK 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 130/418 (31%)
PLN00220 29..438 CDD:215107 130/418 (31%)
tbg-1NP_499131.1 gamma_tubulin 5..431 CDD:276957 128/415 (31%)
PLN00222 7..443 CDD:215108 130/418 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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