DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and tba-4

DIOPT Version :10

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_496351.1 Gene:tba-4 / 174680 WormBaseID:WBGene00006530 Length:448 Species:Caenorhabditis elegans


Alignment Length:429 Identity:166/429 - (38%)
Similarity:259/429 - (60%) Gaps:11/429 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIF 94
            ||:...||||...|....:...:......::::...|:||||::.|||||..:|.:|:|.:.::|
 Worm    21 WELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLF 85

  Fly    95 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL 159
            .|:..:.|:..|.||:|:||||.|.||:|:.||.:|:.|::|..||||.:.||.|||||||..:|
 Worm    86 HPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSL 150

  Fly   160 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTL 224
            |:.::..:|..:....:|:.|:|:||..||||||:.|:.|..:|::|..:.:||||:||||.|.|
 Worm   151 LMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNL 215

  Fly   225 KLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQ 289
            .:..|:|.:||.::|..:|.:|..|||.|.||.||.:...|:||:||:||.:..:.||.|.....
 Worm   216 DVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKAY 280

  Fly   290 YRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWI 354
            :.||:|.::|...|:..|.|..||||:|:|:.|..::||.:..|:|:..:..|:.|.|..||:|.
 Worm   281 HEALSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWC 345

  Fly   355 PNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 411
            |...|..:...||        ..:..:...:.|:|||.|.:.|:..:|..|:.::||:|||.|||
 Worm   346 PTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEG 410

  Fly   412 MDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEEQE 450
            |:|.|||||.   .||.:..:.|:|..||.:...||:.|
 Worm   411 MEEGEFTEAR---EDLAALEKDYEEVGADSNEGLEEDGE 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 PLN00220 29..438 CDD:215107 161/415 (39%)
tba-4NP_496351.1 PTZ00335 1..446 CDD:185562 165/427 (39%)

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