DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTub56D and tba-2

DIOPT Version :10

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_001021050.1 Gene:tba-2 / 173167 WormBaseID:WBGene00006529 Length:448 Species:Caenorhabditis elegans


Alignment Length:429 Identity:170/429 - (39%)
Similarity:261/429 - (60%) Gaps:11/429 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIF 94
            ||:...||||...|.....|..:.|....::::...|:||||::.|||||..:|.:|:|.:.::|
 Worm    21 WELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLF 85

  Fly    95 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL 159
            .|:..:.|:..|.||:|:||||.|.||:|:|||.:|:.|::|..||||.:.||.|||||||..:|
 Worm    86 HPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSL 150

  Fly   160 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTL 224
            |:.::..:|..:....:|:.|:|:||..||||||:.|:.|..:|::|..:.:||||:||||.|.|
 Worm   151 LMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 215

  Fly   225 KLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQ 289
            .:..|:|.:||.::|..:|.:|..|||.|.||.||.:...|:||:||:||.:..:.||.|.....
 Worm   216 DVERPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKAY 280

  Fly   290 YRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWI 354
            :.||:|.::|...|:..|.|..||||||:|:.|..::||.:..|:|:..:..|:.|.:..||:|.
 Worm   281 HEALSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWC 345

  Fly   355 PNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 411
            |...|..:...||        ..:..:...:.|:|||.|.:.|:..:|..|:.::||:|||.|||
 Worm   346 PTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEG 410

  Fly   412 MDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEEQE 450
            |:|.|||||.   .||.:..:.|:|..||.:...|||.|
 Worm   411 MEEGEFTEAR---EDLAALEKDYEEVGADSNEGGEEEGE 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 PLN00220 29..438 CDD:215107 164/415 (40%)
tba-2NP_001021050.1 PTZ00335 1..437 CDD:185562 165/418 (39%)

Return to query results.
Submit another query.