DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and tba-1

DIOPT Version :10

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_001251212.1 Gene:tba-1 / 172831 WormBaseID:WBGene00006528 Length:454 Species:Caenorhabditis elegans


Alignment Length:431 Identity:169/431 - (39%)
Similarity:260/431 - (60%) Gaps:11/431 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 WEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIF 94
            ||:...||||...|....|.....|....::::...|:||||::.|||||..:|.:|:|.:.::|
 Worm    26 WELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLF 90

  Fly    95 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL 159
            .|:..:.|:..|.||:|:||||.|.||:|:|||.:|:.|::|..||||.:.||.|||||||..:|
 Worm    91 HPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSL 155

  Fly   160 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTL 224
            |:.::..:|..:....:|:.|:|:||..||||||:.|:.|..:|::|..:.:||||:||||.|.|
 Worm   156 LMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 220

  Fly   225 KLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQ 289
            .:..|:|.:||.::|..:|.:|..|||.|.||.||.:...|:||:||:||.:..:.||.|.....
 Worm   221 SVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKAY 285

  Fly   290 YRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWI 354
            :.||:|.::|...|:..|.|..||||||:|:.|..::||.:..|:|:..:..|:.|.:..||:|.
 Worm   286 HEALSVNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWC 350

  Fly   355 PNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 411
            |...|..:...||        ..:..:...:.|:|||.|.:.|:..:|..|:.::||:|||.|||
 Worm   351 PTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEG 415

  Fly   412 MDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEEQEAE 452
            |:|.|||||.   .||.:..:.|:|..||.:....||:..|
 Worm   416 MEEGEFTEAR---EDLAALEKDYEEVGADSNEGGNEEEGEE 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 PLN00220 29..438 CDD:215107 164/415 (40%)
tba-1NP_001251212.1 PTZ00335 6..442 CDD:185562 165/418 (39%)

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