DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTub56D and LOC1275720

DIOPT Version :10

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:XP_315005.4 Gene:LOC1275720 / 1275720 VectorBaseID:AGAMI1_006555 Length:441 Species:Anopheles gambiae


Alignment Length:428 Identity:233/428 - (54%)
Similarity:320/428 - (74%) Gaps:1/428 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SRAQTCFWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRS 87
            :|....|||.|.|||.::..|.:.|...|.|:|||||::|:....:|||::..||||.|::.:|.
Mosquito    14 NRVAENFWEYICDEHCLNKEGQFEGQHYLPLQRINVYFDESPCCNFVPRSIFADLEPSTLNYLRC 78

  Fly    88 GPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGT 152
            ..:|.:|.|::|:.|::.||||||:|::||||||:|.:.|..|:..|.|:|||||||.||:||||
Mosquito    79 SRYGSLFSPESFISGKTSAGNNWARGYHTEGAELLDQIEDCTRRMVEGCNCLQGFQLVHSIGGGT 143

  Fly   153 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALY 217
            |||:||||:..:::.:|.:|.||:||:||||||:.|||||||..::..::.::|||:|:||||||
Mosquito   144 GSGLGTLLLENLKDHFPGKITNTFSVIPSPKVSEVVVEPYNAVFALSSMIRSSDETFCLDNEALY 208

  Fly   218 DICFRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 282
            |||..||:|..|...|||||::..|:|:|...|:|||||:|||||..||||:.|||||:||.|||
Mosquito   209 DICVNTLRLPVPDLDDLNHLIASAMAGITCSFRYPGQLNSDLRKLLTNMVPYRRLHFFVPGLAPL 273

  Fly   283 TSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNS 347
            .:|.|:.||..|||||..|:|...|:||||||:.|.:||.|||||||:|.:.|:|.|.:::.||.
Mosquito   274 CARDSECYRQTTVPELVYQLFSTNNLMAACDPQLGTFLTAAAIFRGRLSTRTVEEHMGSVRLKNE 338

  Fly   348 SYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGM 412
            ..|..:||||||:|:||:||||:||:||||.|:|:|.:||:||:.||..|||::|||||||||||
Mosquito   339 LSFSNFIPNNVKSAICDVPPRGMKMAATFIANTTSITQLFRRITGQFGTMFRQRAFLHWYTGEGM 403

  Fly   413 DEMEFTEAESNMNDLVSEYQQY-QEATADEDAEFEEEQ 449
            ||.||||.|..:.|||.||..| :|....:|.|.::|:
Mosquito   404 DEAEFTEMEKGLADLVEEYDSYKEEGRTKDDVEDDDEE 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 PLN00220 29..438 CDD:215107 229/409 (56%)
LOC1275720XP_315005.4 None

Return to query results.
Submit another query.