DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaTub56D and CG32396

DIOPT Version :9

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:NP_729172.1 Gene:CG32396 / 117406 FlyBaseID:FBgn0052396 Length:462 Species:Drosophila melanogaster


Alignment Length:416 Identity:228/416 - (54%)
Similarity:304/416 - (73%) Gaps:6/416 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 FWEIISDEHGID-ATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQ 92
            ||.:||.|||:| |:|.:.|.|.||||||||::|..:..::..|.:|:|.|..|:..:.:.  .|
  Fly    20 FWHVISHEHGVDYASGRFGGTSPLQLERINVFFNATASKRFYARTILIDTEASTIQRLNAS--SQ 82

  Fly    93 IFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMG 157
            ::||:|||.|...||||:|:|::|:||.::|.||:..|:|.||.|.||||||.||:|||||||:.
  Fly    83 LYRPENFVAGSESAGNNFARGYHTDGAAILDQVLENTRREVESVDSLQGFQLLHSIGGGTGSGLT 147

  Fly   158 TLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 222
            :|::..:.|:|||.::..|..:|||.:|..|||||||.||...||.|:..|:|:|||||:.||.|
  Fly   148 SLIMEALVEQYPDNLLCNYVTIPSPNMSQVVVEPYNALLSTPALVNNSHLTFCLDNEALFQICNR 212

  Fly   223 TLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS 287
            .|||....|..:||:|:|||||:||||||||||||.|||:.|||||||||||.:||||||.:...
  Fly   213 NLKLKMSGYEHINHIVALTMSGITTCLRFPGQLNAGLRKIYVNMVPFPRLHFLIPGFAPLVTCKQ 277

  Fly   288 QQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVE 352
            ||:...||.||.||:|.:.|::.|.|.|.|:.||.|.|||||||.:|||:.|..::|||.:.||:
  Fly   278 QQFSKGTVSELVQQIFYSNNLLCAIDLRKGKLLTAAGIFRGRMSPREVDQLMTGVRNKNINNFVD 342

  Fly   353 WIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF 417
            |||||:|||:|||||||||||||||||:||||.||:|:.:...:|.||||.|||||||||:|.||
  Fly   343 WIPNNIKTAICDIPPRGLKMSATFIGNTTAIQTLFQRLLDASMSMLRRKAHLHWYTGEGMEEQEF 407

  Fly   418 TEAESNMNDLVSEYQQYQEATADEDA 443
            .:|:..:..::.:|:...|.   ||:
  Fly   408 QDAQQELQAIIDDYRSSAEG---EDS 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 225/406 (55%)
PLN00220 29..438 CDD:215107 226/409 (55%)
CG32396NP_729172.1 PTZ00010 1..421 CDD:240228 224/402 (56%)
beta_tubulin 2..425 CDD:276956 225/406 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S24
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D962471at2759
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.870

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