DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaTub56D and tubz1

DIOPT Version :10

Sequence 1:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster
Sequence 2:XP_002941372.1 Gene:tubz1 / 100492972 XenbaseID:XB-GENE-5900222 Length:422 Species:Xenopus tropicalis


Alignment Length:426 Identity:111/426 - (26%)
Similarity:176/426 - (41%) Gaps:77/426 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 NEASGGKYVP--------RAVLVDLEPGTM----DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 113
            |.||.....|        .|:.||.||..:    ..|:.|.    .|..|.:.|:.|.|||||.|
 Frog    25 NNASDTDRYPYFSRDGMINAICVDSEPKVIRKLWKRVKKGS----LRDSNLIVGRKGRGNNWAFG 85

  Fly   114 HYTEGAELVDSVL----DVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMN 174
            :..:|.:...|:|    :..|.|.|..||..|..|.|||.||||||:|..|..:||:.||...:.
 Frog    86 YSGDGTDTEKSLLARTMESFRHELERRDCYSGTVLLHSLCGGTGSGLGARLCEEIRDTYPAGHIL 150

  Fly   175 TYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL---TTPTYGDLNH 236
            :.:|.|. :..||.::.||:.|.:..|...:|......|:   ||..|...|   ..|....:..
 Frog   151 SVAVAPH-ETGDTPLQHYNSLLCLSWLQRYSDGILLFQND---DIMHRVAALGEKKVPLVSGVEA 211

  Fly   237 LVSLTM--SGVTTCLR---FPGQLNADLRKLAVNMVPFPRLHFFMP-------GFAPLTSRGSQQ 289
            .||:..  |.:.:||.   :|.........::|.:.|:..:....|       ..|.:..||:..
 Frog   212 PVSIAAMNSHIASCLAGLLYPTNTLRTRSAVSVGIEPWEIIRTLCPMTTLKFLHTAQICRRGTPF 276

  Fly   290 YRALTVPELTQQMFDAKNMMAACDPR---HGR------YLTVAAIFRGRMSMKEVDEQMLNIQNK 345
            :..:|: .||      ||:     ||   .||      .|.|:...:.:..:...|..::.:  |
 Frog   277 WDRVTL-SLT------KNI-----PRTSPDGRLHHSTSLLAVSRASQDKPFLLSQDSVLMKL--K 327

  Fly   346 NSSYFVEWIP---------NNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRK 401
            .|...|.|.|         .|:      :.|.....|.|...|.::..:|..|:.::..:|:..:
 Frog   328 QSYRCVPWNPFPIDYWTGSQNI------LDPSQQSHSLTVCANHSSAADLMSRVIQRAQSMYEAR 386

  Fly   402 AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEA 437
            |:||||...|.:|.:|..|...::.:|.||.:..|:
 Frog   387 AYLHWYQRYGCEEEDFQGAFHTLHSVVEEYNKLGES 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaTub56DNP_725896.1 PLN00220 29..438 CDD:215107 111/426 (26%)
tubz1XP_002941372.1 delta_zeta_tubulin-like 2..417 CDD:276958 109/419 (26%)

Return to query results.
Submit another query.