DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EloC and Eloc

DIOPT Version :9

Sequence 1:NP_523794.1 Gene:EloC / 37237 FlyBaseID:FBgn0266711 Length:117 Species:Drosophila melanogaster
Sequence 2:NP_001257490.1 Gene:Eloc / 64525 RGDID:620658 Length:112 Species:Rattus norvegicus


Alignment Length:114 Identity:103/114 - (90%)
Similarity:108/114 - (94%) Gaps:2/114 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MDEQRGDKIYGGCEGPDAMYVKLISSDGHEFVVKREHALTSGTIRAMLSGPGQFAENEANEVHFR 68
            ||.:  :|.||||||||||||||||||||||:||||||||||||:|||||||||||||.|||:||
  Rat     1 MDGE--EKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR 63

  Fly    69 EIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 117
            |||||||.|||||||||||||||||||||||||||||||||||||||||
  Rat    64 EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EloCNP_523794.1 BTB_POZ_EloC 23..117 CDD:349630 88/93 (95%)
ElocNP_001257490.1 BTB_POZ_EloC 18..112 CDD:349630 88/93 (95%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350587
Domainoid 1 1.000 124 1.000 Domainoid score I5378
eggNOG 1 0.900 - - E1_KOG3473
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38083
Inparanoid 1 1.050 213 1.000 Inparanoid score I3553
OMA 1 1.010 - - QHG54458
OrthoDB 1 1.010 - - D1538795at2759
OrthoFinder 1 1.000 - - FOG0001896
OrthoInspector 1 1.000 - - otm45239
orthoMCL 1 0.900 - - OOG6_102390
Panther 1 1.100 - - LDO PTHR20648
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2559
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

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