DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and ARL1

DIOPT Version :9

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_009723.3 Gene:ARL1 / 852462 SGDID:S000000368 Length:183 Species:Saccharomyces cerevisiae


Alignment Length:168 Identity:55/168 - (32%)
Similarity:95/168 - (56%) Gaps:6/168 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGVSIKAIDMSGATRYRNL 81
            ::.||:|||:.:||::|:  ::....:.....||:||.||.  :....:.:...|:.|.|..|..
Yeast    18 ELRILILGLDGAGKTTIL--YRLQIGEVVTTKPTIGFNVET--LSYKNLKLNVWDLGGQTSIRPY 78

  Fly    82 WEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDMEDSLSSVKIA 146
            |...:.:...:|:|:||:|:.|......||.|:||..:|  :...:|.:.||.|...:||:.:::
Yeast    79 WRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEEL--QDAALLVFANKQDQPGALSASEVS 141

  Fly   147 AALRLENIKDKPWHICSSSAISGEGLGEGVQWLIQQMR 184
            ..|.|..:||:.|.|.:||||.|||:.||:.|||..::
Yeast   142 KELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVIK 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 55/162 (34%)
ARL1NP_009723.3 Arl1 20..177 CDD:206718 55/162 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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