DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and ARF1

DIOPT Version :9

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_010089.1 Gene:ARF1 / 851335 SGDID:S000002351 Length:181 Species:Saccharomyces cerevisiae


Alignment Length:168 Identity:58/168 - (34%)
Similarity:101/168 - (60%) Gaps:6/168 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGVSIKAIDMSGATRYRNL 81
            :|.||::||:.:||::::...|.....|:|  ||:||.||.  :....:|....|:.|..|.|:|
Yeast    17 EMRILMVGLDGAGKTTVLYKLKLGEVITTI--PTIGFNVET--VQYKNISFTVWDVGGQDRIRSL 77

  Fly    82 WEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDMEDSLSSVKIA 146
            |.|.::|..|:|:|:||:||.|....::.:..:|...:|.|  ...|.:.||.|:.:::|:.:|.
Yeast    78 WRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRN--AAWLVFANKQDLPEAMSAAEIT 140

  Fly   147 AALRLENIKDKPWHICSSSAISGEGLGEGVQWLIQQMR 184
            ..|.|.:|:::||.|.::.|.|||||.||::||...::
Yeast   141 EKLGLHSIRNRPWFIQATCATSGEGLYEGLEWLSNSLK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 57/162 (35%)
ARF1NP_010089.1 P-loop_NTPase 5..179 CDD:422963 58/168 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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