DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and ARFD1B

DIOPT Version :10

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_171745.3 Gene:ARFD1B / 839242 AraportID:AT1G02430 Length:190 Species:Arabidopsis thaliana


Alignment Length:194 Identity:61/194 - (31%)
Similarity:104/194 - (53%) Gaps:32/194 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KDKMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGVSIKAIDMSGATRYR 79
            :::..|::.||:.:|||||: |..|:.|..:..:||:|..||.  :.....:::..:|.|...|:
plant    15 QEESRIVLFGLDAAGKSSIM-HKLKTGETLTTTMPTIGTDVES--VKYKDSNLRFWEMGGQQCYK 76

  Fly    80 NLW----EHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQH-----PDLCNRIVPILFYGNKMD 135
              |    :|.|:...|::.|:||:||.|....||.|:.|:..     ||    .|.:|.:|||.:
plant    77 --WFPMTKHDFQEIAGLVLVVDSTDRDRIEDAKDFLNAVIDEIQGSVPD----NVAVLVFGNKHE 135

  Fly   136 MEDSLSSVKIAAALRLENIKDK----PWHICSSSAISGEGLGEGVQWLIQQMRFAMLNNKNAAK 195
            :..::|:.:|:..|.|.:::.|    .||:.||.|.||:||.||:.||:          |||.:
plant   136 VPGAMSASEISNKLDLTSLRQKNWQRNWHVQSSCAFSGDGLHEGLDWLL----------KNAER 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 58/175 (33%)
ARFD1BNP_171745.3 Arf_Arl 19..186 CDD:206644 58/185 (31%)

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