DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and ARLA1D

DIOPT Version :10

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_569051.1 Gene:ARLA1D / 836892 AraportID:AT5G67560 Length:184 Species:Arabidopsis thaliana


Alignment Length:206 Identity:55/206 - (26%)
Similarity:102/206 - (49%) Gaps:29/206 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGMLHNLADLIK--IKKDKMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMS 63
            ||:...|.:.::  ..|.:|.:.::||.|:||:|::| ...:...:..::|||||.:.:  :...
plant     1 MGLWDALLNWLRSLFFKQEMELSLIGLQNAGKTSLVN-VVATGGYSEDMIPTVGFNMRK--VTKG 62

  Fly    64 GVSIKAIDMSGATRYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPIL 128
            .|:||..|:.|..|:|::||...::...|:||:|::|.....|.|.||..:|....|..  :|:|
plant    63 SVTIKLWDLGGQPRFRSMWERYCRSVSAIVYVVDAADPDNLSVSKSELHDLLSKTSLNG--IPLL 125

  Fly   129 FYGNKMDMEDSLSSVKIAAALRLENIKDKPWHIC--SSSAISGEGLGEGVQWLIQQMRFAMLNNK 191
            ..|||:|...:||...:...:.|:::.|:  .:|  ..|..:...:.:.:.||:           
plant   126 VLGNKIDKPGALSKEALTDEMGLKSLTDR--EVCCFMISCKNSTNIDQVIDWLV----------- 177

  Fly   192 NAAKSRSKHSK 202
                   ||||
plant   178 -------KHSK 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 46/164 (28%)
ARLA1DNP_569051.1 Arl10_like 21..179 CDD:206724 46/182 (25%)

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