DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arl6 and ARLA1A

DIOPT Version :10

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_568553.1 Gene:ARLA1A / 833747 AraportID:AT5G37680 Length:184 Species:Arabidopsis thaliana


Alignment Length:193 Identity:59/193 - (30%)
Similarity:105/193 - (54%) Gaps:17/193 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGMLHNLADLIK--IKKDKMTILVLGLNNSGKSSIINHFKKS--SEQTSIVVPTVGFMVEQFYIG 61
            ||:..:|.:.::  ..|.:|.:.::||.|:||:|::|.....  ||.   ::|||||.:.:  :.
plant     1 MGLWDSLLNWLRSLFFKQEMELSLVGLQNAGKTSLVNAIATGGYSED---MIPTVGFNMRK--VT 60

  Fly    62 MSGVSIKAIDMSGATRYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVP 126
            ...|:||..|:.|..|:|.:||...:....|:||||::||....:.:.||:.:|..|.|..  :|
plant    61 KGNVTIKIWDLGGQRRFRTMWERYCRGVSAIVYVIDAADRDSVPISRSELNDLLTKPSLNG--IP 123

  Fly   127 ILFYGNKMDMEDSLSSVKIAAALRLENIKDKP---WHICSSSAISGEGLGEGVQWLIQQMRFA 186
            :|..|||:|..::||...:...|.||::.|:.   :.|....:|:.:.:   :.|||:..|.|
plant   124 LLILGNKIDKSEALSKQALVDQLGLESVTDREVCCYMISCKDSINIDAV---IDWLIKHSRTA 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 52/167 (31%)
ARLA1ANP_568553.1 Arl10_like 21..179 CDD:206724 52/167 (31%)

Return to query results.
Submit another query.