DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arl6 and ARLA1C

DIOPT Version :10

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_190556.2 Gene:ARLA1C / 824149 AraportID:AT3G49870 Length:184 Species:Arabidopsis thaliana


Alignment Length:206 Identity:55/206 - (26%)
Similarity:100/206 - (48%) Gaps:29/206 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGMLHNLADLIK--IKKDKMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMS 63
            ||:|....:.::  ..|.:|.:.::||.|:||:|::| ...:...:..::|||||.:.:  :...
plant     1 MGLLEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVN-VVATGGYSEDMIPTVGFNMRK--VTKG 62

  Fly    64 GVSIKAIDMSGATRYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPIL 128
            .|:||..|:.|..|:|::||...:....|:||:|::|.....|.|.||..:|....|..  :|:|
plant    63 NVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSVSKSELHDLLSKTSLNG--IPLL 125

  Fly   129 FYGNKMDMEDSLSSVKIAAALRLENIKDKPWHIC--SSSAISGEGLGEGVQWLIQQMRFAMLNNK 191
            ..|||:|...:||...:...:.|.::.|:  .:|  ..|..:...:.:.:.||:           
plant   126 VLGNKIDKPGALSKEALTDEMGLTSLTDR--EVCCFMISCKNSTNIDQVIDWLV----------- 177

  Fly   192 NAAKSRSKHSK 202
                   ||||
plant   178 -------KHSK 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 46/164 (28%)
ARLA1CNP_190556.2 Arl10_like 21..179 CDD:206724 46/182 (25%)

Return to query results.
Submit another query.