DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and ARLA1B

DIOPT Version :10

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_190555.2 Gene:ARLA1B / 824148 AraportID:AT3G49860 Length:176 Species:Arabidopsis thaliana


Alignment Length:367 Identity:76/367 - (20%)
Similarity:117/367 - (31%) Gaps:112/367 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 SSVGDSKLLPSASLSRVGQLSGREFSSSNKAKHKMTASKYQIAERGAPNSTDYRVYFKNENGQSI 129
            ||..|:.||.|:.....|   |:.....::|..|....|..::..|.|.||   |:..:|...|:
plant   203 SSTTDAALLASSDTIGAG---GQAHEDQDRAAEKQQLDKGDLSTLGLPPST---VHGGSEGNISL 261

  Fly   130 SPLHDIPLYANDERTVYNMVVEVPRWTNAKME------ISLGEGLNPIKQDVKKGKLRFVANCFP 188
                ::|..|.|           |:.|.|.|:      :.:.|.:. |:|:.:..          
plant   262 ----EVPEGAPD-----------PQRTKAAMDHLHQKILKITEQIK-IEQEARDD---------- 300

  Fly   189 HHGYIWNYGAFPQTWENPDHLDADTGCKGDNDPIDVLEIGSRIAKRGEVLQVKILGTIALIDE-- 251
                  |...:.:...|.|...|                 |||.:..|....|...|||.:.:  
plant   301 ------NVAEYLKLANNADRQQA-----------------SRIKQVFEKKNQKSAQTIAQLHKKL 342

  Fly   252 -------GETDWKIITINVNDPLADQVNDIGDVETVFPGLLRASVEWFKIYKIPDGKPENQFAFN 309
                   .|.:...|:....|.|.|....:.||    ...:||.:..|     ..|..|   ...
plant   343 EHYHKKLKEIEQNGISRQPKDVLRDMQQGLKDV----GANVRAGISGF-----GGGVVE---GVK 395

  Fly   310 GDAKDAAFATKT--VAETHRFWQQLVNK--EVDN---------------NGISCL--NTTVDGSP 353
            |.....:..|.|  |::...|...:.||  ..||               .|...|  :.|:..||
plant   396 GGLSGLSQVTHTAVVSKPREFASLIRNKFGSADNIPHLKDGLEEDGEGQGGNRALSGSATLAPSP 460

  Fly   354 YLVANDAADEVFAKSATGGN---------PEPVSEALDKWHY 386
            ...::|......:.||.||:         ..|.|..||..|:
plant   461 KYGSDDECSSATSGSAGGGSNSGAGQAGPGSPRSNTLDAHHH 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 28/122 (23%)
ARLA1BNP_190555.2 Arl10_like 13..171 CDD:206724
Blue background indicates that the domain is not in the aligned region.

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