DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and ARF1A1C

DIOPT Version :10

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_182239.1 Gene:ARF1A1C / 819330 AraportID:AT2G47170 Length:181 Species:Arabidopsis thaliana


Alignment Length:182 Identity:65/182 - (35%)
Similarity:106/182 - (58%) Gaps:15/182 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KDKMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGVSIKAIDMSGATRYR 79
            |.:|.||::||:.:||::|:...|.....|:|  ||:||.||.  :....:|....|:.|..:.|
plant    15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTI--PTIGFNVET--VEYKNISFTVWDVGGQDKIR 75

  Fly    80 NLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDMEDSLSSVK 144
            .||.|.|:|..|:|:|:||:||.|.|..:|||..:|...:|  |...:|.:.||.|:.:::::.:
plant    76 PLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAE 138

  Fly   145 IAAALRLENIKDKPWHICSSSAISGEGLGEGVQWLIQQMRFAMLNNKNAAKS 196
            |...|.|.:::.:.|:|.|:.|.|||||.||:.|         |:|..|:|:
plant   139 ITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDW---------LSNNIASKA 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 59/162 (36%)
ARF1A1CNP_182239.1 PLN00223 1..181 CDD:165788 64/180 (36%)

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