DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and Arl14

DIOPT Version :9

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_082119.1 Gene:Arl14 / 71619 MGIID:1918869 Length:192 Species:Mus musculus


Alignment Length:187 Identity:51/187 - (27%)
Similarity:105/187 - (56%) Gaps:13/187 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGMLHNLADLIKIKKDKMT-ILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSG 64
            ||:|::     |..:.|.. ||:|||:::|||:::...|.:  :|...:||:||.||...: .|.
Mouse     1 MGLLNS-----KNPQSKQAHILLLGLDSAGKSTLLYRLKFA--ETLSTIPTIGFNVEMVQL-QSS 57

  Fly    65 VSIKAIDMSGATRYRNLWEHQFKNCHGIIYVIDSSD-RMRFVVVKDELDLVLQHPDLCNRIVPIL 128
            :::...|:.|..:.|.:|:...:|..|::||:|.|: :.|....:.|...:|::..:.|  .|::
Mouse    58 LTLTVWDVGGQEKMRTVWDCYCENAQGLMYVVDCSEGKKRLEDSRKEFKHILKNEHIKN--TPVV 120

  Fly   129 FYGNKMDMEDSLSSVKIAAALRLENI-KDKPWHICSSSAISGEGLGEGVQWLIQQMR 184
            ...||.|:..:||:..|....:::.: .::.|::....|::||||.:|.:.|.:.::
Mouse   121 ILANKQDLPGALSAEDITRMFKVKKLCSNRNWYVQPCCAVTGEGLDDGFRKLTEFLK 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 46/165 (28%)
Arl14NP_082119.1 SAR 1..176 CDD:197556 51/184 (28%)
ARLTS1 15..175 CDD:133356 46/164 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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