DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and Arl3

DIOPT Version :10

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_062692.1 Gene:Arl3 / 56350 MGIID:1929699 Length:182 Species:Mus musculus


Alignment Length:196 Identity:68/196 - (34%)
Similarity:106/196 - (54%) Gaps:16/196 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGMLHNLADLIKIKKDKMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGV 65
            ||:|..|..|......::.||:|||:|:||::::...  :||..|.:.||.||.::.  :...|.
Mouse     1 MGLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQL--ASEDISHITPTQGFNIKS--VQSQGF 61

  Fly    66 SIKAIDMSGATRYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDL-CNRIVPILF 129
            .:...|:.|..:.|..|...|:|...:||||||:||.||.....||..:|:...| |   ||:|.
Mouse    62 KLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSC---VPVLI 123

  Fly   130 YGNKMDMEDSLSSVKIAAALRLENIKDKPWHICSSSAISGEGLGEGVQWLIQQMRFAMLNNKNAA 194
            :.||.|:..:..:.:||..|.|..|:|:.|.|.|.||::|||:.:|:.|:.:        |.||.
Mouse   124 FANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCK--------NVNAK 180

  Fly   195 K 195
            |
Mouse   181 K 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 59/163 (36%)
Arl3NP_062692.1 Arl3 3..176 CDD:206721 62/187 (33%)

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