DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and Arl6

DIOPT Version :9

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_001334173.1 Gene:Arl6 / 56297 MGIID:1927136 Length:193 Species:Mus musculus


Alignment Length:179 Identity:100/179 - (55%)
Similarity:135/179 - (75%) Gaps:2/179 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGMLHNLADLIKIKKDKMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGV 65
            ||:|..|:.|:.:||.::.:|.|||:||||::|||..|.|:.|:..:|||:||.:|:|  ..|.:
Mouse     1 MGLLDRLSGLLGLKKKEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIEKF--KSSSL 63

  Fly    66 SIKAIDMSGATRYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFY 130
            |....||||..||||||||.:|:...||:||||||::|.||.|:|||.:|.|||:.:|.:||||:
Mouse    64 SFTVFDMSGQGRYRNLWEHYYKDGQAIIFVIDSSDKLRMVVAKEELDTLLNHPDIKHRRIPILFF 128

  Fly   131 GNKMDMEDSLSSVKIAAALRLENIKDKPWHICSSSAISGEGLGEGVQWL 179
            .||||:.||::|||::..|.||:|||||||||:|.||.||||.|||.||
Mouse   129 ANKMDLRDSVTSVKVSQLLCLESIKDKPWHICASDAIKGEGLQEGVDWL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 93/161 (58%)
Arl6NP_001334173.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846797
Domainoid 1 1.000 201 1.000 Domainoid score I3013
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12960
Inparanoid 1 1.050 211 1.000 Inparanoid score I3648
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 1 1.000 - - FOG0007847
OrthoInspector 1 1.000 - - oto93017
orthoMCL 1 0.900 - - OOG6_105712
Panther 1 1.100 - - LDO PTHR11711
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2408
SonicParanoid 1 1.000 - - X5803
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

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