DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and zgc:110286

DIOPT Version :9

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_001017602.1 Gene:zgc:110286 / 550265 ZFINID:ZDB-GENE-050417-68 Length:181 Species:Danio rerio


Alignment Length:169 Identity:47/169 - (27%)
Similarity:95/169 - (56%) Gaps:6/169 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KDKMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGVSIKAIDMSGATRYR 79
            |.::.::::||:.:||::::  :|....:....:||:||.||.  :....:|....|:.|.|:.|
Zfish    16 KKQIRLVMVGLDAAGKTTVL--YKLKLGEVVSTIPTIGFNVET--VEYKNISFTVWDVGGQTKIR 76

  Fly    80 NLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDMEDSLSSVK 144
            .||::.::...|:|:|:||||..|.....:||:.:|...::.:.::.:|  .||.|:..::...:
Zfish    77 GLWKYYYQYSQGLIFVVDSSDHERIETAAEELNAMLAEDEMRDAVLLVL--ANKQDLPKAMPVHE 139

  Fly   145 IAAALRLENIKDKPWHICSSSAISGEGLGEGVQWLIQQM 183
            :...|.|..:..:.|.:.|:.|:.|.||.||:.||..|:
Zfish   140 LTDRLGLRALTGRQWFVQSTCAVQGSGLYEGLDWLSNQL 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 45/162 (28%)
zgc:110286NP_001017602.1 P-loop_NTPase 1..181 CDD:304359 47/169 (28%)
SAR 3..175 CDD:197556 45/164 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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