DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and arl1

DIOPT Version :10

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_001016396.1 Gene:arl1 / 549150 XenbaseID:XB-GENE-961332 Length:181 Species:Xenopus tropicalis


Alignment Length:168 Identity:57/168 - (33%)
Similarity:96/168 - (57%) Gaps:6/168 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGVSIKAIDMSGATRYRNL 81
            :|.||:|||:.:||::|:...:.....|:|  ||:||.||.  :....:..:..|:.|.|..|..
 Frog    17 EMRILILGLDGAGKTTILYRLQVGEVVTTI--PTIGFNVET--VTYKNLKFQVWDLGGQTSIRPY 77

  Fly    82 WEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDMEDSLSSVKIA 146
            |...:.|...:|||:||.||.|..:.|.||..:|:..:|...|  ::.:.||.|||.:::..::|
 Frog    78 WRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELKKAI--LVVFANKQDMEQAMTPTEVA 140

  Fly   147 AALRLENIKDKPWHICSSSAISGEGLGEGVQWLIQQMR 184
            .:|.|..:||:.|.|..:||..|.||.|.::||::.::
 Frog   141 NSLGLPALKDRRWQIFKTSATKGTGLDEAMEWLVESLK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 56/162 (35%)
arl1NP_001016396.1 Arl1 19..175 CDD:206718 56/161 (35%)

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