DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arl6 and arl5b

DIOPT Version :10

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_001006744.1 Gene:arl5b / 448415 XenbaseID:XB-GENE-996906 Length:179 Species:Xenopus tropicalis


Alignment Length:161 Identity:58/161 - (36%)
Similarity:94/161 - (58%) Gaps:8/161 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ILVLGLNNSGKSSIINHFKKSS-EQTSIVVPTVGFMVEQFYIGMSGVSIKAIDMSGATRYRNLWE 83
            ::::||:|:||::::..|..:. ..||   ||:|..||:  |.:........|:.|....|:.|.
 Frog    19 VIIVGLDNAGKTTLLYQFLMNEVVHTS---PTIGSNVEE--IVVKNTHFLMWDIGGQESLRSSWN 78

  Fly    84 HQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDMEDSLSSVKIAAA 148
            ..:.|...||.|:||:||.|..:.|:||..:|.|.||  |...:|.:.||.|::..:|:..|:..
 Frog    79 TYYSNTEFIILVVDSTDRERLSITKEELYRMLAHEDL--RKAAVLIFANKQDIKGCMSAADISKY 141

  Fly   149 LRLENIKDKPWHICSSSAISGEGLGEGVQWL 179
            |.|.:|||.||||.|..|::||||.:|::|:
 Frog   142 LTLSSIKDHPWHIQSCCALTGEGLCQGLEWM 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 58/161 (36%)
arl5bNP_001006744.1 Arl5_Arl8 3..175 CDD:133353 58/161 (36%)

Return to query results.
Submit another query.