DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and arl4a

DIOPT Version :9

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_001006711.1 Gene:arl4a / 448350 XenbaseID:XB-GENE-5783083 Length:200 Species:Xenopus tropicalis


Alignment Length:183 Identity:56/183 - (30%)
Similarity:93/183 - (50%) Gaps:20/183 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ILVLGLNNSGKSSII-----NHFKKSSEQTSIVVPTVGFMVEQFYIGMSG---VSIKAIDMSGAT 76
            |.:|||:.:||::::     |.|..:       |||.||..|:..:.:..   |:....|:.|..
 Frog    23 IAILGLDCAGKTTVLYRLQFNEFVNT-------VPTKGFNAEKIKVSLGNSKTVTFHFWDVGGQE 80

  Fly    77 RYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDMEDSLS 141
            :.|.||:...:...||::|:||.|..|....|.||..:.:..:  |:.||:|...||.|:.:||:
 Frog    81 KLRPLWKSYTRCTDGIVFVVDSVDAERMEEAKTELHKITKISE--NQGVPVLIVANKQDLRNSLT 143

  Fly   142 SVKIAAALRLENI-KDKPWHICSSSAISGEGLGEGVQWLIQQM--RFAMLNNK 191
            ..:|...|.|... ...|||:.::.||.|:||.||::.|.:.:  |..||..:
 Frog   144 LSEIEKLLALNEFGSSTPWHLQATCAIIGDGLREGIEKLYEMIIKRRKMLRQQ 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 53/170 (31%)
arl4aNP_001006711.1 Arl4_Arl7 18..200 CDD:206719 56/183 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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