DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and Arf102F

DIOPT Version :9

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_001259087.1 Gene:Arf102F / 43823 FlyBaseID:FBgn0013749 Length:180 Species:Drosophila melanogaster


Alignment Length:169 Identity:58/169 - (34%)
Similarity:98/169 - (57%) Gaps:6/169 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KDKMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGVSIKAIDMSGATRYR 79
            |.:|.||::||:.:||::|:...|.....|:|  ||:||.||.  :....:.....|:.|..:.|
  Fly    15 KKQMRILMVGLDAAGKTTILYKLKLGEIVTTI--PTIGFNVET--VEYKNICFTVWDVGGQDKIR 75

  Fly    80 NLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDMEDSLSSVK 144
            .||.|.|:|..|:|:|:||:||.|....:.||..:||..:|  |...:|.:.||.|:.:::::.:
  Fly    76 PLWRHYFQNTQGLIFVVDSNDRDRITEAERELQNMLQEDEL--RDAVLLVFANKQDLPNAMTAAE 138

  Fly   145 IAAALRLENIKDKPWHICSSSAISGEGLGEGVQWLIQQM 183
            :...|||..::::.|.|.|:.|..|.||.||:.||..::
  Fly   139 LTDKLRLNQLRNRHWFIQSTCATQGHGLYEGLDWLSAEL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 56/162 (35%)
Arf102FNP_001259087.1 YlqF_related_GTPase 1..180 CDD:424112 58/169 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455853
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11711
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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