DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and arl1

DIOPT Version :10

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_001002473.1 Gene:arl1 / 436746 ZFINID:ZDB-GENE-040718-175 Length:181 Species:Danio rerio


Alignment Length:168 Identity:59/168 - (35%)
Similarity:97/168 - (57%) Gaps:6/168 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGVSIKAIDMSGATRYRNL 81
            :|.||:|||:.:||::|:...:.....|:|  ||:||.||.  :....:..:..|:.|.|..|..
Zfish    17 EMRILILGLDGAGKTTILYRLQVGEVVTTI--PTIGFNVET--VTYKNLKFQVWDLGGQTSIRPY 77

  Fly    82 WEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDMEDSLSSVKIA 146
            |...:.|...:|||:|||||.|..:.|.||..:|:..:|...|  ::.:.||.|||.:::..::|
Zfish    78 WRCYYSNTDAVIYVVDSSDRDRMGISKSELVAMLEEEELKKAI--LVVFANKQDMEQAMTPTEVA 140

  Fly   147 AALRLENIKDKPWHICSSSAISGEGLGEGVQWLIQQMR 184
            .||.|..:||:.|.|..:||..|.||.|.::||::.::
Zfish   141 NALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVESLK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 58/162 (36%)
arl1NP_001002473.1 Arl1 19..175 CDD:206718 58/161 (36%)

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