DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and arl5a

DIOPT Version :9

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_001002339.1 Gene:arl5a / 436611 ZFINID:ZDB-GENE-040718-28 Length:179 Species:Danio rerio


Alignment Length:165 Identity:54/165 - (32%)
Similarity:99/165 - (60%) Gaps:6/165 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGVSIKAIDMSGATRYRNLWEH 84
            ::::||:|:||::|:..|  |..:.....||:|..||:  |.::.......|:.|....|:.|..
Zfish    19 VIIVGLDNAGKTTILYQF--SMNEVVHTSPTIGSNVEE--IVVNNTHFLMWDIGGQESLRSSWNT 79

  Fly    85 QFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDMEDSLSSVKIAAAL 149
            .:.|...:|.|:||:||.|..|.::||..:|.|.||  :...:|.:.||.|::..|:..:|:.:|
Zfish    80 YYTNTEFVIVVVDSTDRERISVTREELYRMLAHEDL--KKAGLLIFANKQDVKGCLTVAEISQSL 142

  Fly   150 RLENIKDKPWHICSSSAISGEGLGEGVQWLIQQMR 184
            :|.::||..|||.:..|::||||.:|::|::.::|
Zfish   143 QLTSVKDHQWHIQACCALTGEGLCQGLEWMMSRLR 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 53/161 (33%)
arl5aNP_001002339.1 Arl5_Arl8 3..175 CDD:133353 53/161 (33%)
SAR 8..172 CDD:197556 52/158 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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