DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and CG17819

DIOPT Version :9

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster


Alignment Length:189 Identity:52/189 - (27%)
Similarity:91/189 - (48%) Gaps:23/189 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 IKK------DKMTILVLGLNNSGKSSIINH----FKKSSEQTSIVVPTVGFMVEQFYIGMSGVSI 67
            |||      .|..:|:|||:|:|||::.:.    |...|::::..|....|.:..|       .:
  Fly    10 IKKILPAGSQKSCLLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSFTINNF-------RV 67

  Fly    68 KAIDMSGATRYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGN 132
            :..|::|..:.|.:|...:|..:.:|:|:||:|.:|....:..|..||.|.:|.|  .|:|...|
  Fly    68 QLWDINGELKNRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDN--APLLIVSN 130

  Fly   133 KMDMEDSLSSVKIAAALRLENIKDKPWHICSSSAISGEGLGEGVQWLIQQMRFAMLNNK 191
            |.|...|||...:...:.|..:..:.|.....|..:|.|:.|.|.|:.:::.    ||:
  Fly   131 KKDASGSLSMSTVIDLMGLYRLTGRDWTFEECSMRTGSGVQEIVNWINEKIN----NNR 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 46/166 (28%)
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 46/166 (28%)
Ras 23..183 CDD:278499 46/172 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455829
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11711
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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