DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and Arl2

DIOPT Version :9

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster


Alignment Length:180 Identity:61/180 - (33%)
Similarity:102/180 - (56%) Gaps:7/180 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGMLHNLADLIKIKKDKMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGV 65
            ||.|..|..: :.|:.:|.||:|||:|:||::|:..|  :.|....:.||:||.::.  :..:|.
  Fly     1 MGFLTVLKKM-RQKEREMRILLLGLDNAGKTTILKRF--NGEPIDTISPTLGFNIKT--LEHNGY 60

  Fly    66 SIKAIDMSGATRYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFY 130
            ::...|:.|....|:.|.:.|::..|:::|:||:||||......||.::||...|....:.:|. 
  Fly    61 TLNMWDVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLC- 124

  Fly   131 GNKMDMEDSLSSVKIAAALRLENIKDKPWHICSSSAISGEGLGEGVQWLI 180
             ||.|:..:|||.:|...|.||:|....|.:...||::||.|...:.|||
  Fly   125 -NKQDLPGALSSNEIKEILHLEDITTHHWLVAGVSAVTGEKLLSSMDWLI 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 55/162 (34%)
Arl2NP_476886.1 Arl2 3..175 CDD:206720 59/178 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455859
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.850

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