DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arl6 and Arl8

DIOPT Version :10

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_649769.1 Gene:Arl8 / 40961 FlyBaseID:FBgn0037551 Length:186 Species:Drosophila melanogaster


Alignment Length:187 Identity:55/187 - (29%)
Similarity:99/187 - (52%) Gaps:20/187 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KDKMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGVSIKAIDMSGATRYR 79
            |::|.:.::||..|||::.:|.. .|.:....::|||||.:.:  |....|:||..|:.|..|:|
  Fly    18 KEEMELTLVGLQFSGKTTFVNVI-ASGQFAEDMIPTVGFNMRK--ITRGNVTIKVWDIGGQPRFR 79

  Fly    80 NLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDMEDSLSSVK 144
            ::||...:..:.|:|::|::|..:....::||..:|..|.|..  :|:|..|||.|:..:|....
  Fly    80 SMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAG--IPVLVLGNKRDLPGALDETG 142

  Fly   145 IAAALRLENIKDKPWHIC--SSSAISGEGLGEGVQWLIQQMRFAMLNNKNAAKSRSK 199
            :...:.|.:|:|:  .||  |.|....:.:...:|||||.           :||:|:
  Fly   143 LIERMNLSSIQDR--EICCYSISCKEKDNIDITLQWLIQH-----------SKSQSR 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 49/164 (30%)
Arl8NP_649769.1 Arl10_like 22..180 CDD:206724 49/164 (30%)

Return to query results.
Submit another query.