DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and arf2a

DIOPT Version :9

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_958912.1 Gene:arf2a / 399477 ZFINID:ZDB-GENE-040122-4 Length:181 Species:Danio rerio


Alignment Length:185 Identity:63/185 - (34%)
Similarity:108/185 - (58%) Gaps:11/185 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GMLHNLADLIKIKKDKMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGVS 66
            |:..||     :.|.:|.||::||:.:||::|:...|.....|:|  ||:||.||.  :....:|
Zfish     7 GLFKNL-----LGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI--PTIGFNVET--VEYKNIS 62

  Fly    67 IKAIDMSGATRYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYG 131
            ....|:.|..:.|.||.|.|:|..|:|:|:||:||.|....::||..:|...:|  |...:|.:.
Zfish    63 FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDEL--RDAVLLVFA 125

  Fly   132 NKMDMEDSLSSVKIAAALRLENIKDKPWHICSSSAISGEGLGEGVQWLIQQMRFA 186
            ||.|:.:::::.:|...|.|.:::.:.|:|.::.|.||:||.||:.||..|::.|
Zfish   126 NKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLKNA 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 56/162 (35%)
arf2aNP_958912.1 P-loop_NTPase 5..179 CDD:304359 62/182 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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