DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and arl3l1

DIOPT Version :9

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_956987.1 Gene:arl3l1 / 393666 ZFINID:ZDB-GENE-040426-1649 Length:187 Species:Danio rerio


Alignment Length:178 Identity:54/178 - (30%)
Similarity:100/178 - (56%) Gaps:6/178 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GMLHNLADLIKIKKDKMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGVS 66
            |:...:..|....:.::.|::|||:|:||::::...  :||..:.:.||.||.::.  :...|:.
Zfish     7 GLFSVIEKLKGTTEQELRIVLLGLDNAGKTTLLKQL--ASEDVNTITPTQGFNIKS--VTCDGMK 67

  Fly    67 IKAIDMSGATRYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYG 131
            :...|:.|..:.|..|:...:|...:||||||:|:.||.....||..::...:|  :.||:|.:.
Zfish    68 LNVWDIGGQRKIRPFWKKYLENTDLLIYVIDSADKKRFEETGLELSELIDEENL--KGVPLLIFA 130

  Fly   132 NKMDMEDSLSSVKIAAALRLENIKDKPWHICSSSAISGEGLGEGVQWL 179
            ||.|:..:..:.:||..|.|...:|:.|.|.:.||:||||:.:|:.|:
Zfish   131 NKQDLATASPASEIAEGLNLHTYRDREWQIQACSAVSGEGVQDGMNWI 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 52/161 (32%)
arl3l1NP_956987.1 Arl3 8..181 CDD:206721 53/177 (30%)
SAR 17..182 CDD:197556 52/168 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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