DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and Arl5

DIOPT Version :10

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_648201.1 Gene:Arl5 / 38931 FlyBaseID:FBgn0035866 Length:179 Species:Drosophila melanogaster


Alignment Length:186 Identity:63/186 - (33%)
Similarity:109/186 - (58%) Gaps:11/186 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGMLHNLADLIKI-KKDKMTILVLGLNNSGKSSIINHFKKSS-EQTSIVVPTVGFMVEQFYIGMS 63
            ||:|  |:.|.:: ..::..::::||:|:||::|:..|..:. ..||   ||:|..||:  :...
  Fly     1 MGLL--LSRLWRMFGNEEHKLVMVGLDNAGKTTILYQFLMNEVVHTS---PTIGSNVEE--VVWR 58

  Fly    64 GVSIKAIDMSGATRYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPIL 128
            .:.....|:.|....|..|...:.|...:|.||||:||.|..|.::||..:|||.||..  ..:|
  Fly    59 NIHFLVWDLGGQQSLRAAWSTYYTNTELVIMVIDSTDRERLAVTREELYRMLQHEDLSK--ASLL 121

  Fly   129 FYGNKMDMEDSLSSVKIAAALRLENIKDKPWHICSSSAISGEGLGEGVQWLIQQMR 184
            .|.||.|::.|:|:.:|:..|.|.:||...|||.:..|::||||.:|::|::|:::
  Fly   122 VYANKQDLKGSMSAAEISRQLDLTSIKKHQWHIQACCALTGEGLYQGLEWIVQRIK 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 57/163 (35%)
Arl5NP_648201.1 Arl5_Arl8 3..175 CDD:133353 60/180 (33%)

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