DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and arf3b

DIOPT Version :10

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_001012248.1 Gene:arf3b / 368822 ZFINID:ZDB-GENE-030616-356 Length:181 Species:Danio rerio


Alignment Length:186 Identity:64/186 - (34%)
Similarity:110/186 - (59%) Gaps:10/186 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGMLHNLADLIK--IKKDKMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMS 63
            ||.:  ..:|:|  |.|.:|.||::||:.:||::|:...|.....|:|  ||:||.||.  :...
Zfish     1 MGNI--FGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI--PTIGFNVET--VEYK 59

  Fly    64 GVSIKAIDMSGATRYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPIL 128
            .:|....|:.|..:.|.||.|.|:|..|:|:|:||:||.|....::||..:|...:|  |...:|
Zfish    60 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDEL--RDAVLL 122

  Fly   129 FYGNKMDMEDSLSSVKIAAALRLENIKDKPWHICSSSAISGEGLGEGVQWLIQQMR 184
            .:.||.|:.:::::.:|...|.|.:::.:.|:|.::.|.||:||.||:.||..|::
Zfish   123 VFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLK 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 56/162 (35%)
arf3bNP_001012248.1 P-loop containing Nucleoside Triphosphate Hydrolases 5..179 CDD:476819 62/180 (34%)

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