DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and arl4ab

DIOPT Version :10

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_956612.1 Gene:arl4ab / 338267 ZFINID:ZDB-GENE-030219-167 Length:201 Species:Danio rerio


Alignment Length:170 Identity:52/170 - (30%)
Similarity:84/170 - (49%) Gaps:19/170 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ILVLGLNNSGKSSII-----NHFKKSSEQTSIVVPTVGFMVEQFYIGMSGVSIKAI----DMSGA 75
            |::|||:.:||::::     |.|..:       |||.||..|:..:.:...|..|.    |:.|.
Zfish    23 IVILGLDCAGKTTVLYRLRFNEFVNT-------VPTKGFNTEKIKVNLGPKSRTATFHFWDVGGQ 80

  Fly    76 TRYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDMEDSL 140
            .:.|.||....:...|:::|:||.|..|....|.||..:.:..:  |..||:|...||.|:..:|
Zfish    81 EKLRPLWRSYTRCADGLVFVVDSVDAERMEEAKTELHKITRLQE--NLGVPVLVVANKQDLRSAL 143

  Fly   141 SSVKIAAALRLENI-KDKPWHICSSSAISGEGLGEGVQWL 179
            ...::...|.|..: ...|||:..:.||.||||.||::.|
Zfish   144 PLSEVEQMLALNELGSHTPWHLQPACAIIGEGLQEGLERL 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 52/170 (31%)
arl4abNP_956612.1 Arl4_Arl7 18..201 CDD:206719 52/170 (31%)

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