DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and arl4ab

DIOPT Version :9

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_956612.1 Gene:arl4ab / 338267 ZFINID:ZDB-GENE-030219-167 Length:201 Species:Danio rerio


Alignment Length:170 Identity:52/170 - (30%)
Similarity:84/170 - (49%) Gaps:19/170 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ILVLGLNNSGKSSII-----NHFKKSSEQTSIVVPTVGFMVEQFYIGMSGVSIKAI----DMSGA 75
            |::|||:.:||::::     |.|..:       |||.||..|:..:.:...|..|.    |:.|.
Zfish    23 IVILGLDCAGKTTVLYRLRFNEFVNT-------VPTKGFNTEKIKVNLGPKSRTATFHFWDVGGQ 80

  Fly    76 TRYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDMEDSL 140
            .:.|.||....:...|:::|:||.|..|....|.||..:.:..:  |..||:|...||.|:..:|
Zfish    81 EKLRPLWRSYTRCADGLVFVVDSVDAERMEEAKTELHKITRLQE--NLGVPVLVVANKQDLRSAL 143

  Fly   141 SSVKIAAALRLENI-KDKPWHICSSSAISGEGLGEGVQWL 179
            ...::...|.|..: ...|||:..:.||.||||.||::.|
Zfish   144 PLSEVEQMLALNELGSHTPWHLQPACAIIGEGLQEGLERL 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 52/170 (31%)
arl4abNP_956612.1 Arl4_Arl7 18..201 CDD:206719 52/170 (31%)
Gem1 23..>148 CDD:224025 38/133 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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