DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and arf6a

DIOPT Version :10

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_956287.1 Gene:arf6a / 336063 ZFINID:ZDB-GENE-030131-8007 Length:175 Species:Danio rerio


Alignment Length:171 Identity:60/171 - (35%)
Similarity:96/171 - (56%) Gaps:7/171 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LIKIKKDK-MTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGVSIKAIDMS 73
            |.||..:| |.||:|||:.:||::|:  :|....|:...:|||||.||.  :....|.....|:.
Zfish     5 LSKIFGNKEMRILMLGLDAAGKTTIL--YKLKLGQSVTTIPTVGFNVET--VTYKNVKFNVWDVG 65

  Fly    74 GATRYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDMED 138
            |..:.|.||.|.:....|:|:|:|.:||.|....:.||..::...::.:.|  ||.:.||.|:.|
Zfish    66 GQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAI--ILIFANKQDLPD 128

  Fly   139 SLSSVKIAAALRLENIKDKPWHICSSSAISGEGLGEGVQWL 179
            ::...:|...|.|..|:|:.|::..|.|.:|:||.||:.||
Zfish   129 AMKPHEIQEKLGLTRIRDRNWYVQPSCATTGDGLYEGLTWL 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 55/161 (34%)
arf6aNP_956287.1 ARF 1..175 CDD:128474 60/171 (35%)

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