DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Arl6 and arf-5

DIOPT Version :9

Sequence 1:	NP_611421.1	Gene:	Arl6 / 37236	FlyBaseID:	FBgn0034446	Length:	202	Species:	Drosophila melanogaster
Sequence 2:	NP_501336.1	Gene:	arf-5 / 177595	WormBaseID:	WBGene00000183	Length:	180	Species:	Caenorhabditis elegans

Alignment Length:	169	Identity:	56/169 - (33%)
Similarity:	99/169 - (58%)	Gaps:	6/169 - (3%)

- Green bases have known domain annotations that are detailed below.

  Fly    15 KDKMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGVSIKAIDMSGATRYR 79
            |.::.||::||:.:||::|:...|.....|:|  ||:||.||.  :....:|....|:.|..:.|
Worm    15 KRQVRILMVGLDAAGKTTILYKLKLGEIVTTI--PTIGFNVET--VEYKNISFTVWDVGGQDKIR 75

  Fly    80 NLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDMEDSLSSVK 144
            .||.|.|:|..|:|:|:||:|:.|....::||..:|...:|  |...:|.:.||.|:.:::::.:
Worm    76 PLWRHYFQNTQGLIFVVDSNDKERIEESREELHKMLNEDEL--RDATLLVFANKQDLPNAMTAAE 138

  Fly   145 IAAALRLENIKDKPWHICSSSAISGEGLGEGVQWLIQQM 183
            :...|.|.|::.:.|:|.::.|..|.||.||:.||..|:
Worm   139 LTDKLGLHNLRSRQWYIQATCATQGHGLYEGLDWLSNQL 177

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Arl6	NP_611421.1	Arl6	19..182	CDD:206722	54/162 (33%)
arf-5	NP_501336.1	P-loop_NTPase	1..179	CDD:304359	56/169 (33%)
arf-5	NP_501336.1	SAR	15..174	CDD:197556	54/164 (33%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0070
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53833
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820