DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and Y54E10BR.2

DIOPT Version :10

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:NP_491094.1 Gene:Y54E10BR.2 / 171878 WormBaseID:WBGene00021841 Length:191 Species:Caenorhabditis elegans


Alignment Length:176 Identity:39/176 - (22%)
Similarity:85/176 - (48%) Gaps:11/176 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KKDKMTILVLGLNNSGKSSII----NHFKKSSE--QTSIVVPTVGFMVEQFYIGMSGVSIKAIDM 72
            ||....::::||:|:||::.:    :||.|...  ..|.:..|||.....  :.::...:...|:
 Worm    14 KKKDYYVVIVGLDNAGKTTFLEQTKSHFVKDYGVLNPSKITATVGLNTGN--VELNNTCLHFWDL 76

  Fly    73 SGATRYRNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDME 137
            .|....|.||...:.:.:.:|:|:|::....|.:|..:...|:.:..:.|  :|:|...||.:||
 Worm    77 GGQESLRELWATYYDDANAMIFVVDATRSDLFPIVASQFKEVMANEIVQN--IPVLVAVNKSEME 139

  Fly   138 DSLSSVKIAAALRLENIKDKPWHICSSSAISGEGLGEGVQWLIQQM 183
            .:.::.::...|..:|.: ....:...||:.|..:...|.|:::.:
 Worm   140 GAAAAAEVRMLLEDDNHR-SDLAVLPVSALEGTNIERCVHWIVRSL 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 37/168 (22%)
Y54E10BR.2NP_491094.1 Arfrp1 19..183 CDD:206725 37/168 (22%)

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