DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arl6 and Arl14

DIOPT Version :9

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:XP_008759336.1 Gene:Arl14 / 103690167 RGDID:9465124 Length:192 Species:Rattus norvegicus


Alignment Length:202 Identity:58/202 - (28%)
Similarity:112/202 - (55%) Gaps:13/202 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGMLHNLADLIKIKKDKMT-ILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSG 64
            ||:|.:     |..|||.. ||:|||:::|||:::...|.:  :|...:||:||.||...: .||
  Rat     1 MGLLSS-----KNPKDKQAHILLLGLDSAGKSTLLYRLKFA--ETLATIPTIGFNVEMVQL-QSG 57

  Fly    65 VSIKAIDMSGATRYRNLWEHQFKNCHGIIYVIDSSD-RMRFVVVKDELDLVLQHPDLCNRIVPIL 128
            :::...|:.|..:.|.:|:...:|.||::||:|.|: :.|....:.|...:|::..:.|  .|::
  Rat    58 LALTVWDIGGQEKMRTVWDCYCENAHGLVYVVDCSEGQKRLEDSRKEFKHILKNEHIKN--TPVV 120

  Fly   129 FYGNKMDMEDSLSSVKIAAALRLENI-KDKPWHICSSSAISGEGLGEGVQWLIQQMRFAMLNNKN 192
            ...||.|:..:||:..|....:::.: .|:.|::....|::||||.:|.:.|.:.::..:...:.
  Rat   121 ILANKQDLPGALSAEDITRMFKVKKLCSDRNWYVQPCCAVTGEGLDDGFRKLTEFVKSHLKTRET 185

  Fly   193 AAKSRSK 199
            .|..:.|
  Rat   186 LAFFKQK 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 49/165 (30%)
Arl14XP_008759336.1 ARLTS1 15..175 CDD:133356 49/164 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1271528at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.