DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl6 and si:ch1073-165f9.2

DIOPT Version :9

Sequence 1:NP_611421.1 Gene:Arl6 / 37236 FlyBaseID:FBgn0034446 Length:202 Species:Drosophila melanogaster
Sequence 2:XP_002663882.1 Gene:si:ch1073-165f9.2 / 100333040 ZFINID:ZDB-GENE-141216-228 Length:181 Species:Danio rerio


Alignment Length:170 Identity:55/170 - (32%)
Similarity:95/170 - (55%) Gaps:6/170 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KKDKMTILVLGLNNSGKSSIINHFKKSSEQTSIVVPTVGFMVEQFYIGMSGVSIKAIDMSGATRY 78
            :|.:..:|:.||:.:||::::...|.....|:|  ||:||.||.  :....:|....|.||.|..
Zfish    14 EKKETRLLMFGLDAAGKTTVLYKLKLGEVVTTI--PTIGFNVET--VEYKNISFTVWDFSGQTTM 74

  Fly    79 RNLWEHQFKNCHGIIYVIDSSDRMRFVVVKDELDLVLQHPDLCNRIVPILFYGNKMDMEDSLSSV 143
            ::||.|.:.|..|:|:|:|||||.|.....:||:|:|...:|.:.::.:|  .||.|:..::.:.
Zfish    75 KSLWRHYYSNTQGLIFVVDSSDRDRIETAAEELNLLLAEDELRDAVLLVL--ANKQDLPKAMPAQ 137

  Fly   144 KIAAALRLENIKDKPWHICSSSAISGEGLGEGVQWLIQQM 183
            ::...|.|..:..:.|.:.|:.|:.|.||.||..||..|:
Zfish   138 ELTDRLGLHALTGRQWFVQSTCAVQGSGLYEGFDWLTDQL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl6NP_611421.1 Arl6 19..182 CDD:206722 53/162 (33%)
si:ch1073-165f9.2XP_002663882.1 P-loop_NTPase 1..180 CDD:304359 55/170 (32%)
SAR 15..174 CDD:197556 53/164 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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