DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL11 and AT3G58700

DIOPT Version :10

Sequence 1:NP_477054.1 Gene:RpL11 / 37235 FlyBaseID:FBgn0013325 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_191429.1 Gene:AT3G58700 / 825039 AraportID:AT3G58700 Length:182 Species:Arabidopsis thaliana


Alignment Length:179 Identity:131/179 - (73%)
Similarity:147/179 - (82%) Gaps:5/179 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AVTKKIKRDPAKNPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGI 67
            |..||:     .|||||:.::||.|||.|||||||||||:||||||:||.|||||||||||||||
plant     2 ASEKKL-----SNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGI 61

  Fly    68 RRNEKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYG 132
            |||||||.:.||||.||.::||.||||:||||.|.|||.||.||||||||||||||||||.||||
plant    62 RRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYG 126

  Fly   133 LDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILN 181
            :||||||.||||.|..|:|....||.|||:||:|||||||.||:|:|||
plant   127 MDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILN 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL11NP_477054.1 PTZ00156 15..181 CDD:185485 126/165 (76%)
AT3G58700NP_191429.1 PTZ00156 4..175 CDD:185485 128/175 (73%)

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