DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fak and Shark

DIOPT Version :10

Sequence 1:NP_001137718.1 Gene:Fak / 37233 FlyBaseID:FBgn0020440 Length:1500 Species:Drosophila melanogaster
Sequence 2:NP_524743.2 Gene:Shark / 44353 FlyBaseID:FBgn0015295 Length:939 Species:Drosophila melanogaster


Alignment Length:916 Identity:217/916 - (23%)
Similarity:329/916 - (35%) Gaps:299/916 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PPTKNEINSEEYLIHVHMPNKSFKAVRFNVKETVFHVIR---RTVEDLGTDGRTPSIQRYACRML 72
            ||.....:....|:|        :|...|..:.||.:::   |..:....||:|           
  Fly   111 PPHNTRSHGVTNLLH--------RATSKNESKVVFELLKCGYRNFDAKNQDGQT----------- 156

  Fly    73 NMITKEVIWLARSTSMQKVLSHILTP----------GCS--NVDCPNNQSELDEVLLE-----HG 120
                  .:.||...|.:.:|.|:|..          ||.  :....:..:.....|:.     .|
  Fly   157 ------ALHLAALHSDEDILKHLLNAKVQVNSSDSFGCQPLHYAARSKPASFIRTLISAQANVQG 215

  Fly   121 RRITDNRVWRVELRVRYVP----------NNIQELFEED------KATCFYYFNQVK-------E 162
            |.| ||         .|||          ..:|||...:      .::..:.|:..|       |
  Fly   216 RNI-DN---------GYVPLHEAAKHGNLEAVQELLLAEAPPLPRTSSGEFPFDLAKEAGQTAVE 270

  Fly   163 DFI------QANVT-------AIDTEVAVQLCCLGIRHYFKNITVKAPDKKQH----IDYIEKEI 210
            :|:      .||.|       .:..|.||.:    ::.:.|.:..|.|:....    :.|.|...
  Fly   271 EFLLNYKLPPANTTRDQWYHGTLTREEAVAI----LKKHAKELLAKQPEVDTSGCFLVRYSESPA 331

  Fly   211 GFKSFLPQSVIATSKPKNLK----------KLIQVGYKKVYNYND------IEYLTRFFDLLKNI 259
            .  |.|..:::.....||.:          ..:|.|..|....:|      :|:|          
  Fly   332 A--SGLVLTLLCDQVVKNFRISQADLYQNGNKVQSGGSKFLYIDDGPYWPSVEHL---------- 384

  Fly   260 YLTNFEQFSVTL-----------------------------SSAWNISGILHVGPHIGISYQTHP 295
             :.:|.:||..|                             .:|...:....|.||   |:..||
  Fly   385 -IAHFMRFSYGLPVSLKYPVPPQPKPEVPSFATIPRSNMKPKAASPATPPTPVSPH---SHHQHP 445

  Fly   296 QASLKNVAQFK------DVVSIKTCTLPKEKL--------------------SKSGENT-TEPEL 333
            ......:.:.|      .:.:....|.||:.|                    |.||... ||.||
  Fly   446 HVPALTITKKKQKENSSSMFNTLRLTSPKKALFDMNSLRKNKSKGKRSDSESSVSGSLAGTEQEL 510

  Fly   334 Q----------------NFNC---------------NCQKIKTQIKI-------SASNNVE---- 356
            |                .||.               |..:..|.|:|       .....||    
  Fly   511 QAAAPMLKSLSFSTEFSTFNADGVTGSGAAAAGEVYNVPRNNTPIEIDLPPIAQKTEAEVEYFTK 575

  Fly   357 -DLVI--------TCNGINTAESIADLIDGYCRLLSKDLEFTIWHRETNASNEDSAKALPNDATL 412
             |:.|        ..||......:..|:|                      .:..|.|:....:|
  Fly   576 SDVAIERERAGQWIGNGYQPTMDVLSLLD----------------------QQIKAPAVARLNSL 618

  Fly   413 GSNKSTSSQGKPMLTDDYAEIGLLEGEGDYSTPTVRNYELD--RALITP-----SAKIGVGQFGD 470
            |.|.||.|:....|.        .:..|..|||:....|..  |..|.|     ..:||.|:||.
  Fly   619 GPNASTESEMASYLH--------RKCSGTPSTPSATEVEAAKLRFFIEPEKLVLDREIGHGEFGS 675

  Fly   471 VYVGTYTLPKLGKGKNLAGNGKNSNSDQRNADSRPDVIQVAIKTCKANDDPEKTENFLAEAYIMQ 535
            |:.| :.|.|.|.|:                :||   ::||||  ..:|:....:.||.||.:|.
  Fly   676 VHSG-WLLRKSGAGE----------------ESR---LEVAIK--MLSDEHSNKQEFLREASVMM 718

  Fly   536 KFDHPHIIRLIGICSVMPIWIVMELAKLGELRAYLKTNSERLSHGTLLK-YCYQLSTALSYLESK 599
            :.:|..|:|||||.....:.:|.|||.||.:..|:..:...::....|| :..|::..:.||||:
  Fly   719 RLEHKCIVRLIGIAKGEMLMMVQELAPLGSMLQYILDHGHEITANAELKVWASQIACGMHYLESQ 783

  Fly   600 KFVHRDIAARNVLVSSPTCVKLADFGLSRWVSDQS-YYHSTPTVALPIKWMSPESINFRRFTTAS 663
            .|||||:||||:|:::....|::|||:||.:...| .|..|.....||:|.:|||.|...|:.||
  Fly   784 HFVHRDLAARNILLTARHQAKISDFGMSRSLRPGSTEYQFTQGGRWPIRWYAPESFNLGIFSHAS 848

  Fly   664 DVWMFGVCIWEILMLGVKPFQGVKNSDVILKLENGERLPLPPNCPPRLYSLMSQCWAYEPLKRPN 728
            |||.|||.|||:..||..|:..:.|.|.|..:::|||||.|..||..:|::|..||...|..||.
  Fly   849 DVWSFGVTIWEMFSLGAPPYGEISNVDAIKLVDSGERLPQPNLCPAYIYAVMQSCWKERPKDRPT 913

  Fly   729 FKRIKE 734
            |..:.|
  Fly   914 FVYLTE 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FakNP_001137718.1 B41 24..267 CDD:214604 55/318 (17%)
FERM_B-lobe 152..257 CDD:271216 25/144 (17%)
FERM_C_FAK1 263..394 CDD:270011 38/237 (16%)
PTKc_FAK 450..744 CDD:133187 109/294 (37%)
Focal_AT 1250..1376 CDD:460992
SharkNP_524743.2 SH2_Nterm_shark_like 8..91 CDD:198210
ANKYR <94..317 CDD:440430 45/244 (18%)
ANK repeat 124..151 CDD:293786 6/34 (18%)
ANK repeat 153..184 CDD:293786 9/47 (19%)
ANK repeat 186..217 CDD:293786 4/30 (13%)
ANK repeat 220..245 CDD:293786 7/33 (21%)
SH2_Cterm_shark_like 287..395 CDD:198211 21/124 (17%)
PTKc_Syk_like 666..926 CDD:270650 105/276 (38%)
Blue background indicates that the domain is not in the aligned region.

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