DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fak and Src42A

DIOPT Version :9

Sequence 1:NP_001137718.1 Gene:Fak / 37233 FlyBaseID:FBgn0020440 Length:1500 Species:Drosophila melanogaster
Sequence 2:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster


Alignment Length:552 Identity:152/552 - (27%)
Similarity:238/552 - (43%) Gaps:144/552 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 QTHPQASLKNVAQFKDVVSIKTCTLPKEKLSKSGENTTEPELQNFNCNCQKIKTQIKISASNNVE 356
            |.|.|..|.......:.:.:.:.|..::.|.:....|.      ..|.|.....::.::|.....
  Fly  1092 QQHQQTPLAKKHSLDNCLQVVSSTTSRQPLRRWSNQTP------LKCTCHPATEELPLTAIEKSR 1150

  Fly   357 DLVITCNGINTAESIADL--ID-------------------GYCRLLSKDLEFT--------IWH 392
            .|...|:. :.:.:.|.|  ||                   |..|.||   |||        .|:
  Fly  1151 SLPAACSA-SCSHTCAHLSVIDQSPATTKCFGKTSLTTAKKGKSRRLS---EFTRGEFLNEKSWY 1211

  Fly   393 -------------------------RETNASNEDSAKALPNDAT--------------------- 411
                                     |::.:.:.|.:.::.:..|                     
  Fly  1212 FRKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDYSLSVRDGDTVKHYRIRQLDEGGFFIARRTT 1276

  Fly   412 ------LGSNKSTSSQG------KPMLTDDYAEIGLLEGEGDYSTPTVRNYELDRALITPSAKIG 464
                  |..:.|..|.|      ||.:   ..|..:.||   .|..|...:|:||..:....|:|
  Fly  1277 FRTLQELVEHYSKDSDGLCVNLCKPCV---QIEKPVTEG---LSHRTRDQWEIDRTSLKFVRKLG 1335

  Fly   465 VGQFGDVYVGTY--TLPKLGKGKNLAGNGKNSNSDQRNADSRPDVIQVAIKTCKAND-DPEKTEN 526
            .||||||:.|.:  |.|                              |||||.|:.. ||   ::
  Fly  1336 SGQFGDVWEGLWNNTTP------------------------------VAIKTLKSGTMDP---KD 1367

  Fly   527 FLAEAYIMQKFDHPHIIRLIGICSV-MPIWIVMELAKLGELRAYLKT---NSERLSHGTLLKYCY 587
            |||||.||:|..|..:|:|..:|:| .||:|:.||.|.|.|..||:.   ....|...||:....
  Fly  1368 FLAEAQIMKKLRHTKLIQLYAVCTVEEPIYIITELMKHGSLLEYLQAIAGKGRSLKMQTLIDMAA 1432

  Fly   588 QLSTALSYLESKKFVHRDIAARNVLVSSPTCVKLADFGLSRWVSDQSYYHSTPTVALPIKWMSPE 652
            |::..::||||:.::|||:|||||||.....||:|||||:|.:.:.. |.:......||||.:||
  Fly  1433 QIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIKEDE-YEARVGARFPIKWTAPE 1496

  Fly   653 SINFRRFTTASDVWMFGVCIWEILMLGVKPFQGVKNSDVILKLENGERLPLPPNCPPRLYSLMSQ 717
            :.|:.:|:..||||.||:.:.|::..|..|:.|:.|::|:.::|:|.|:|.||||.||||.:|.:
  Fly  1497 AANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQPPNCEPRLYEIMLE 1561

  Fly   718 CWAYEPLKRPNFKRIKETLHEILIEDSINSSE 749
            ||..:|::||.|:.::..|.:....|..:..|
  Fly  1562 CWHKDPMRRPTFETLQWKLEDFYTSDQSDYKE 1593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FakNP_001137718.1 B41 24..267 CDD:214604
FERM_B-lobe 152..257 CDD:271216
FERM_C_FAK1 263..394 CDD:270011 24/155 (15%)
PTKc_FAK 450..744 CDD:133187 112/300 (37%)
Pkinase_Tyr 462..736 CDD:285015 108/280 (39%)
Focal_AT 1249..1376 CDD:281606
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 8/90 (9%)
PTKc_Frk_like 1319..1587 CDD:270653 112/301 (37%)
Pkinase_Tyr 1328..1580 CDD:285015 108/285 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468394
Domainoid 1 1.000 165 1.000 Domainoid score I1208
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.